As Bruce Schneier has commented: he's not against targeted surveillance, undertaken with cause and a specific warrant.
It's bulk surveillance of everyone, everywhere and at all times, that's a problem.
Taking measures which raise the cost of surveillance helps ensure that if they get your data, it's because they really want it. Not just because they can.
This standard response misses the nuance of end-to-end encryption: If the default everywhere was EoE encryption, it becomes significantly harder for anyone to target you (for an average value of you)